cellxgene-skill
Submit compact CELLxGENE Discover API requests for public collection and dataset metadata. Use when a user wants concise single-cell collection summaries Published by openai in plugins.
What is cellxgene-skill?
Submit compact CELLxGENE Discover API requests for public collection and dataset metadata. Use when a user wants concise single-cell collection summaries Published by openai in plugins. This profile combines repository metadata with install, compatibility, and usage signals so developers can quickly decide whether it fits their agent workflow before opening the source repository.
Automated repository signals based on public metadata such as recency, license, installation evidence, and adoption. These are not a security audit or endorsement.
Key capabilities
- Includes SKILL.md support
- Reusable instructions support
- Documentation
- Data analysis
- Documentation use cases
- Data analysis use cases
Technical details
- Install or run with Copy skill directory
When to use cellxgene-skill
- Use it for documentation.
- Use it for data analysis.
Built with
Editorial notes
Source
- Creator: openai
- Repository: openai/plugins
- Skill file: plugins/life-science-research/skills/cellxgene-skill/SKILL.md
What it does
Submit compact CELLxGENE Discover API requests for public collection and dataset metadata. Use when a user wants concise single-cell collection summaries
Skill instructions
Operating rules - Use scripts/restrequest.py for all CELLxGENE Discover calls. - Use baseurl=https://api.cellxgene.cziscience.com/curation/v1. - Prefer targeted collection detail lookups rather than full archive dumps by default. - The public collections list can be large and may require a higher timeoutsec; collection detail lookups are usually the better first call. - Re-run requests in long conversations instead of relying on older tool output. Execution behavior - Return concise markdown summaries from the script JSON by default. - Return raw JSON only if the user explicitly asks for machine-readable output. - Prefer these paths: collections/<collectionid first, then collections when the user explicitly wants broad archive discovery. Input - Read one JSON object from stdin. - Required fields: baseurl, path - Optional fields: method, params, headers, jsonbody, formbody, recordpath, responseformat, maxitems, maxdepth, timeoutsec, saveraw, rawoutputpath - Common CELLxGENE patterns: -
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Frequently asked questions
What is cellxgene-skill?
cellxgene-skill is a open-source AI agent skill with Copy skill directory. Submit compact CELLxGENE Discover API requests for public collection and dataset metadata. Use when a user wants concise single-cell collection summaries
Who is cellxgene-skill best for?
cellxgene-skill is best for reusing agent instructions, scripts, and references, documentation workflows, data analysis workflows.
How do I install cellxgene-skill?
Install or run cellxgene-skill using Copy skill directory. Check cellxgene-skill for the latest setup command.
Is cellxgene-skill actively maintained?
cellxgene-skill may need a closer maintenance check before production use.
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